Package: GRIN2
Title: Genomic Random Interval (GRIN)
Version: 2.0.0
Authors@R: 
    c(person("Abdelrahman", "Elsayed", email = "aelsayed@stjude.org", role = c("aut", "cre", "cph"),
           comment = c(ORCID = "0000-0002-8150-6825")),
      person("Xueyuan", "Cao", email = "xcao12@uthsc.edu", role = c("aut")),
      person("Lakshmi Anuhya", "patibandla", email = "lakshmianuhya.patibandla@stjude.org", role = c("aut")),
      person("Stanley", "Pounds", email = "stanley.pounds@stjude.org", role = c("aut", "cph")))
Description: Improved version of 'GRIN' software that streamlines its
        use in practice to analyze genomic lesion data, accelerate its
        computing, and expand its analysis capabilities to answer
        additional scientific questions including a rigorous evaluation
        of the association of genomic lesions with RNA expression.
        Pounds, Stan, et al. (2013)
        <DOI:10.1093/bioinformatics/btt372>.
License: GPL (>= 3)
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Imports: circlize, data.table, dplyr, forcats, ggplot2, graphics,
        grDevices, grid, magrittr, stats, stringr, survival, tibble,
        tidyselect, utils, writexl
Suggests: knitr, rmarkdown, biomaRt, gridGraphics, Gviz, ensembldb,
        GenomeInfoDb, ComplexHeatmap,
NeedsCompilation: no
Maintainer: Abdelrahman Elsayed <aelsayed@stjude.org>
Depends: R (>= 4.2.0)
LazyData: true
VignetteBuilder: knitr
URL: https://github.com/abdel-elsayed87/GRIN2
BugReports: https://github.com/abdel-elsayed87/GRIN2/issues
Config/pak/sysreqs: libicu-dev zlib1g-dev
Repository: https://abdel-elsayed87.r-universe.dev
Date/Publication: 2025-06-23 21:51:28 UTC
RemoteUrl: https://github.com/abdel-elsayed87/grin2
RemoteRef: HEAD
RemoteSha: 7c5c4bd9fd89ffaa26bdec963d46f72a5ebb6373
Packaged: 2026-06-18 09:06:09 UTC; root
Author: Abdelrahman Elsayed [aut, cre, cph] (ORCID:
    <https://orcid.org/0000-0002-8150-6825>),
  Xueyuan Cao [aut],
  Lakshmi Anuhya patibandla [aut],
  Stanley Pounds [aut, cph]